[ci skip] Add missing javadoc links (#9497)

patches/api/0002-Build-system-changes.patch

@@ -5,7 +5,7 @@ Subject: [PATCH] Build system changes
 
 
 diff --git a/build.gradle.kts b/build.gradle.kts
-index c2e5d8006420aab5a60e5aaa188223aeb0396483..ffd1c792b0e0fe1ed3da85cf933202c5193734ce 100644
+index c2e5d8006420aab5a60e5aaa188223aeb0396483..394665bf1d4b485bb0cefd24162f1ef4c255f160 100644
 --- a/build.gradle.kts
 +++ b/build.gradle.kts
 @@ -18,15 +18,27 @@ dependencies {
@@ -37,16 +37,21 @@ index c2e5d8006420aab5a60e5aaa188223aeb0396483..ffd1c792b0e0fe1ed3da85cf933202c5
      testImplementation("org.apache.commons:commons-lang3:3.12.0")
      testImplementation("junit:junit:4.13.2")
      testImplementation("org.hamcrest:hamcrest-library:1.3")
-@@ -68,7 +80,7 @@ tasks.withType<Javadoc> {
+@@ -68,8 +80,12 @@ tasks.withType<Javadoc> {
      options.links(
          "https://guava.dev/releases/31.1-jre/api/docs/",
          "https://javadoc.io/doc/org.yaml/snakeyaml/2.0/",
 -        "https://javadoc.io/doc/org.jetbrains/annotations-java5/$annotationsVersion/",
 +        "https://javadoc.io/doc/org.jetbrains/annotations/$annotationsVersion/", // Paper - we don't want Java 5 annotations
          "https://javadoc.io/doc/net.md-5/bungeecord-chat/$bungeeCordChatVersion/",
++        // Paper start - add missing javadoc links
++        "https://javadoc.io/doc/org.joml/joml/1.10.5/index.html",
++        "https://www.javadoc.io/doc/com.google.code.gson/gson/2.10",
++        // Paper end
      )
      options.tags("apiNote:a:API Note:")
-@@ -84,3 +96,14 @@ tasks.withType<Javadoc> {
+ 
+@@ -84,3 +100,14 @@ tasks.withType<Javadoc> {
          }
      }
  }

patches/api/0005-Adventure.patch

@@ -7,7 +7,7 @@ Co-authored-by: zml <zml@stellardrift.ca>
 Co-authored-by: Jake Potrebic <jake.m.potrebic@gmail.com>
 
 diff --git a/build.gradle.kts b/build.gradle.kts
-index 19720f73cb8454d6ddd8d75e7d08556d61436505..82310336813b5c2d7c6f708839cb6f3928293445 100644
+index c44e0485ba54b3d15fa4fd7d1250bcbc1ce809d5..1a4512bc5aef7e89dca53f8352e9008b4de537e3 100644
 --- a/build.gradle.kts
 +++ b/build.gradle.kts
 @@ -10,12 +10,24 @@ java {
@@ -50,13 +50,17 @@ index 19720f73cb8454d6ddd8d75e7d08556d61436505..82310336813b5c2d7c6f708839cb6f39
      // Paper end
  
      compileOnly("org.apache.maven:maven-resolver-provider:3.8.5")
-@@ -83,10 +102,26 @@ tasks.withType<Javadoc> {
+@@ -83,14 +102,30 @@ tasks.withType<Javadoc> {
          "https://guava.dev/releases/31.1-jre/api/docs/",
          "https://javadoc.io/doc/org.yaml/snakeyaml/2.0/",
          "https://javadoc.io/doc/org.jetbrains/annotations/$annotationsVersion/", // Paper - we don't want Java 5 annotations
 -        "https://javadoc.io/doc/net.md-5/bungeecord-chat/$bungeeCordChatVersion/",
++        // "https://javadoc.io/doc/net.md-5/bungeecord-chat/$bungeeCordChatVersion/", // Paper - don't link to bungee chat
+         // Paper start - add missing javadoc links
+         "https://javadoc.io/doc/org.joml/joml/1.10.5/index.html",
+         "https://www.javadoc.io/doc/com.google.code.gson/gson/2.10",
+         // Paper end
 +        // Paper start
-+        // "https://javadoc.io/doc/net.md-5/bungeecord-chat/$bungeeCordChatVersion/", // don't link to bungee chat
 +        "https://jd.advntr.dev/api/$adventureVersion/",
 +        "https://jd.advntr.dev/text-minimessage/$adventureVersion/",
 +        "https://jd.advntr.dev/text-serializer-gson/$adventureVersion/",

patches/api/0008-Paper-Plugins.patch

@@ -5,7 +5,7 @@ Subject: [PATCH] Paper Plugins
 
 
 diff --git a/build.gradle.kts b/build.gradle.kts
-index ba6f0a70ba2442dbe60ed6cc92e4fb91a48d9f3b..22b65c3ad4ed6e19b88a51a2e001f0e5846d9ae6 100644
+index 85e370ab77b7f3ec6c77c1d6750ce220777dbce5..713f5d73743007d47eca70167058f207626d2298 100644
 --- a/build.gradle.kts
 +++ b/build.gradle.kts
 @@ -47,7 +47,7 @@ dependencies {
@@ -17,6 +17,14 @@ index ba6f0a70ba2442dbe60ed6cc92e4fb91a48d9f3b..22b65c3ad4ed6e19b88a51a2e001f0e5
      compileOnly("org.apache.maven.resolver:maven-resolver-connector-basic:1.7.3")
      compileOnly("org.apache.maven.resolver:maven-resolver-transport-http:1.7.3")
      compileOnly("com.google.code.findbugs:jsr305:1.3.9") // Paper
+@@ -118,6 +118,7 @@ tasks.withType<Javadoc> {
+         "https://jd.advntr.dev/text-serializer-plain/$adventureVersion/",
+         "https://jd.advntr.dev/text-logger-slf4j/$adventureVersion/",
+         // Paper end
++        "https://javadoc.io/doc/org.apache.maven.resolver/maven-resolver-api/1.7.3", // Paper
+     )
+     options.tags("apiNote:a:API Note:")
+ 
 diff --git a/src/main/java/io/papermc/paper/plugin/PermissionManager.java b/src/main/java/io/papermc/paper/plugin/PermissionManager.java
 new file mode 100644
 index 0000000000000000000000000000000000000000..cdbc93b317b3bab47bf6552c29cfbb2c27846933

patches/api/0069-Allow-plugins-to-use-SLF4J-for-logging.patch

@@ -14,7 +14,7 @@ it without having to shade it in the plugin and going through
 several layers of logging abstraction.
 
 diff --git a/build.gradle.kts b/build.gradle.kts
-index 8c93ff28273ef9ddce2fb7a62ac50701fa3cd9a2..8045f92ffdfb4164bcbef99c41359590c45f9006 100644
+index 713f5d73743007d47eca70167058f207626d2298..460bd4029b5a01e39b2322e69aecc128a073ee3a 100644
 --- a/build.gradle.kts
 +++ b/build.gradle.kts
 @@ -11,6 +11,8 @@ java {
@@ -35,15 +35,15 @@ index 8c93ff28273ef9ddce2fb7a62ac50701fa3cd9a2..8045f92ffdfb4164bcbef99c41359590
  
      implementation("org.ow2.asm:asm:9.4")
      implementation("org.ow2.asm:asm-commons:9.4")
-@@ -113,6 +117,8 @@ tasks.withType<Javadoc> {
+@@ -117,6 +121,8 @@ tasks.withType<Javadoc> {
          "https://jd.advntr.dev/text-serializer-legacy/$adventureVersion/",
          "https://jd.advntr.dev/text-serializer-plain/$adventureVersion/",
          "https://jd.advntr.dev/text-logger-slf4j/$adventureVersion/",
 +        "https://javadoc.io/doc/org.slf4j/slf4j-api/$slf4jVersion/",
 +        "https://javadoc.io/doc/org.apache.logging.log4j/log4j-api/$log4jVersion/",
          // Paper end
+         "https://javadoc.io/doc/org.apache.maven.resolver/maven-resolver-api/1.7.3", // Paper
      )
-     options.tags("apiNote:a:API Note:")
 diff --git a/src/main/java/org/bukkit/plugin/Plugin.java b/src/main/java/org/bukkit/plugin/Plugin.java
 index 8c76716249e44ed8bf6be94c1f5c7b6d9bb35be2..4eb639fbb46a0848be207149ea433455550fae1c 100644
 --- a/src/main/java/org/bukkit/plugin/Plugin.java